l_bbinom: calculate joint likelihood of allele data

l_bbinomR Documentation

calculate joint likelihood of allele data

Description

calculate joint likelihood of allele data

Usage

l_bbinom(AD, DP, alpha, beta)

Arguments

AD

numeric vector Variant allele depth

DP

numeric vector Total allele depth

alpha

numeric Alpha parameter of Beta-Binomial distribution

beta

numeric Beta parameter of Beta-Binomial distribution

Value

numeric Joint log likelihood


whtns/numbat documentation built on Nov. 8, 2022, 10:48 a.m.