l_gpois: calculate joint likelihood of a gamma-poisson model
In whtns/numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
l_gpois R Documentation
calculate joint likelihood of a gamma-poisson model
Description
calculate joint likelihood of a gamma-poisson model
Usage
l_gpois(Y_obs, lambda_ref, d, alpha, beta, phi = 1)
Arguments
Y_obs
numeric vector Gene expression counts
lambda_ref
numeric vector Reference expression levels
d
numeric Total library size
alpha
numeric Alpha parameter of Gamma-Poisson distribution
beta
numeric Beta parameter of Gamma-Poisson distribution
Value
numeric Joint log likelihood
whtns/numbat documentation built on Nov. 8, 2022, 10:48 a.m.
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| l_gpois | R Documentation |
calculate joint likelihood of a gamma-poisson model
Description
calculate joint likelihood of a gamma-poisson model
Usage
l_gpois(Y_obs, lambda_ref, d, alpha, beta, phi = 1)
Arguments
Y_obs |
numeric vector Gene expression counts |
lambda_ref |
numeric vector Reference expression levels |
d |
numeric Total library size |
alpha |
numeric Alpha parameter of Gamma-Poisson distribution |
beta |
numeric Beta parameter of Gamma-Poisson distribution |
Value
numeric Joint log likelihood
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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