findPathwaysByText: Find Pathways By Text

In wikipathways/rWikiPathways: rWikiPathways - R client library for the WikiPathways API

Find Pathways By Text

Description

Retrieve pathways matching the query text.

Usage

findPathwaysByText(query = NULL, field = NULL)

Arguments

query	A character string to search for, e.g., "cancer". Case insensitive.
field	Optional character string to restrict search to a single field, e.g., id, name, description, species, revision, authors, datanodes, annotations, or citedIn.

Details

Searches id, name, description, species, revision date, authors, datanode labels, ontology annotations, and citedIn (e.g., PMCIDs).

Value

A dataframe of pathway attributes including the matching attributes

Examples

{
findPathwaysByText('cancer')
findPathwaysByText('cancer','name')
}

wikipathways/rWikiPathways documentation built on Jan. 10, 2024, 11:37 p.m.