readGMTnames: Read GMT File for Names
In wikipathways/rWikiPathways: rWikiPathways - R client library for the WikiPathways API
readGMTnames R Documentation
Read GMT File for Names
Description
Reads any generic GMT file to produce a data frame of
term-name associations useful in enrichment analyses and other
applications.
Usage
readGMTnames(file)
Arguments
file
Path to GMT file
Details
The returned data frame includes only terms and names. If you want
another data frame with terms and genes, then see readGMT.
Value
Data frame of term-namee associations
See Also
readGMT
Examples
#readGMTnames(system.file("extdata","my_gmt_file.gmt", package="rWikiPathways"))
#readGMTnames("path_to_your_gmt_file.gmt")
wikipathways/rWikiPathways documentation built on Nov. 1, 2024, 9 p.m.
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| readGMTnames | R Documentation |
Read GMT File for Names
Description
Reads any generic GMT file to produce a data frame of term-name associations useful in enrichment analyses and other applications.
Usage
readGMTnames(file)
Arguments
file |
Path to GMT file |
Details
The returned data frame includes only terms and names. If you want another data frame with terms and genes, then see readGMT.
Value
Data frame of term-namee associations
See Also
readGMT
Examples
#readGMTnames(system.file("extdata","my_gmt_file.gmt", package="rWikiPathways"))
#readGMTnames("path_to_your_gmt_file.gmt")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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