alleleUsageBar_html: Graphical output of allele usage in given population
In williamdlees/vdjbasevis: multiple visualizations for genotypes

The alleleUsageBar_html function generates an interactive graphical output of sum of unique allele that appeared in the given population.

1	alleleUsageBar_html(gene_segment, chain = c("IGH", "IGK", "IGL"))

`gene_segment`	a data frame of allele usage count in a given population. See details.
`chain`	the IG chain: IGH,IGK,IGL. Default is IGH.

A data.frame with the following columns.

An interactive stacked barplot visualization of the allele hetrouzygousity in a given population.

1 2	gene_segment <- data.frame(GENE = c("V1-2",'V3-3','D2-8','D3-16','J4','J6'), COUNT = c(2,9,2,2,1,2)) alleleUsageBar_html(gene_segment)

williamdlees/vdjbasevis documentation built on Sept. 13, 2020, 12:17 a.m.

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