GetPatterns: Generate all possible patterns in a multiple condition study

In wiscstatman/EBSeq: An R package for gene and isoform differential expression analysis of RNA-seq data

Generate all possible patterns in a multiple condition study

Description

'GetPatterns' generates all possible patterns in a multiple condition study.

Usage

GetPatterns(Conditions)

Arguments

Conditions

The names of the Conditions in the study.

Value

A matrix describe all possible patterns.

Author(s)

Ning Leng

References

Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)

Examples

Conditions = c("C1","C1","C2","C2","C3","C3")
PosParti = GetPatterns(Conditions)

wiscstatman/EBSeq documentation built on June 3, 2023, 7:34 a.m.