PlotPattern: Visualize the patterns
In wiscstatman/EBSeq: An R package for gene and isoform differential expression analysis of RNA-seq data
PlotPattern R Documentation
Visualize the patterns
Description
'PlotPattern' generates the visualized patterns before the multiple condition test.
Usage
PlotPattern(Patterns)
Arguments
Patterns
The output of GetPatterns function.
Value
A heatmap to visualize the patterns of interest.
Author(s)
Ning Leng
References
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Examples
Conditions = c("C1","C1","C2","C2","C3","C3")
Patterns = GetPatterns(Conditions)
PlotPattern(Patterns)
wiscstatman/EBSeq documentation built on June 3, 2023, 7:34 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| PlotPattern | R Documentation |
Visualize the patterns
Description
'PlotPattern' generates the visualized patterns before the multiple condition test.
Usage
PlotPattern(Patterns)
Arguments
Patterns |
The output of GetPatterns function. |
Value
A heatmap to visualize the patterns of interest.
Author(s)
Ning Leng
References
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Examples
Conditions = c("C1","C1","C2","C2","C3","C3")
Patterns = GetPatterns(Conditions)
PlotPattern(Patterns)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.