generate_sliding: Generate list of character sets to visualize

In wrightaprilm/treesiftr: Visualizing The Relationship Between Phylogeny and Data

Description

Generate a dataframe of start and stop values. These will determine what character sets from the total phylogenetic matrix will appear in each visualization

Usage

generate_sliding(phy_mat, start_char, stop_char, steps)

Arguments

phy_mat	Name of the phylogenetic matrix from which character sets will be sampled
start_char	Integer indicating where in the data set to begin generating character sets
stop_char	Integer indicating where in the data set to stop generating character sets
steps	Integer indicating how many characters will be in each set

Value

df Dataframe of slices from the original phylogenetic matrix to be visualized.

Examples

sample_df <- generate_sliding(bears, 1, 10, 2)

wrightaprilm/treesiftr documentation built on July 15, 2019, 11:19 a.m.