MSspec.fillPeaks: Function to fill in missing peaks
In xia-lab/MetaboAnalystR3.0: An R Package for Comprehensive Analysis of Metabolomics Data
View source: R/general_proc_utils.R
Description
For each sample in the processed MS spectra data, this function will fill in missing peaks
using the fillPeaks function from the XCMS package. First, the function will identify any peak groups that are missing
any peaks from the samples and will then fill in those peaks by rereading the raw data and
integrating signals at those regions to create a new peak.
Usage
1
MSspec.fillPeaks(mSetObj=NA)
Arguments
mSetObj
Input the name of the created mSetObj (see InitDataObjects)
xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.
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View source: R/general_proc_utils.R
Description
For each sample in the processed MS spectra data, this function will fill in missing peaks using the fillPeaks function from the XCMS package. First, the function will identify any peak groups that are missing any peaks from the samples and will then fill in those peaks by rereading the raw data and integrating signals at those regions to create a new peak.
Usage
1 | MSspec.fillPeaks(mSetObj=NA)
|
Arguments
mSetObj |
Input the name of the created mSetObj (see InitDataObjects) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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