API for xiayh17/RNAseqStat
A Pipeline to Process RNAseq Data
| Global functions | |
|---|---|
| %<>% | Man page |
| %>% | Man page |
| ALLEXTID | Source code |
| DEG_container-class | Man page |
| DEG_df | Man page |
| DESeq2_qc | Source code |
| EXTID2TERMID | Source code |
| TERM2NAME | Source code |
| TERMID2EXTID | Source code |
| barplot_base | Man page Source code |
| barplot_base2 | Man page Source code |
| cor500_check | Source code |
| corall_check | Source code |
| counts_input | Man page |
| create_DEG_container | Source code |
| cut_much | Man page Source code |
| deg_DESeq2 | Man page Source code |
| deg_edgeR | Man page Source code |
| deg_limma | Man page Source code |
| deg_run | Man page Source code |
| enhance_barplot | Man page Source code |
| enhance_build_Anno | Source code |
| enhance_enrichGO | Man page Source code |
| enhance_enricher_internal | Man page Source code |
| enhance_get_GO2TERM_table | Source code |
| enhance_get_GO_data | Source code |
| enhance_gseplot | Man page Source code |
| enhance_heatmap | Man page Source code |
| enhance_volcano | Man page Source code |
| enhance_volcano_plot | Source code |
| enrichGO_run | Man page Source code |
| enrichKEGG_run | Man page Source code |
| enrich_go | Man page Source code |
| enrich_gsekegg | Man page Source code |
| enrich_kegg | Man page Source code |
| enrichgesKEGG_run | Man page Source code |
| geskegg_barplot | Man page Source code |
| get_enriched | Source code |
| get_geneSet_index | Source code |
| go_res | Man page |
| group_list | Man page |
| kegg_barplot | Man page Source code |
| pca_check | Source code |
| pre_check | Man page Source code |
| reexports | Man page |
| runAll | Man page Source code |
| run_DESeq2 | Man page Source code |
| run_edgeR | Man page Source code |
| run_limma | Man page Source code |
| show_genes | Source code |
| sort_goTerms | Source code |
| theme_nice | Source code |
| top1000_check | Source code |
| top_deg | Man page Source code |
