enhance_gseplot: plot gseKEGG plot

In xiayh17/RNAseqStat: A Pipeline to Process RNAseq Data

plot gseKEGG plot

Description

plot gseKEGG plots by up and down

Usage

enhance_gseplot(data, top = 10, pvalue_cut = 0.1, enrichmentScore_cut = 0.5)

Arguments

data	output from enrich_gseKEGG
top	filter top by pvalue
pvalue_cut	filter cut of pvalue
enrichmentScore_cut	filter cut of enrichmentScore

Value

a list contains up and down

Examples

## Not run: 
gsekegg_res <- enrich_gsekegg(DEG_df,x = "log2FoldChange")
plots_l <- enhance_gseplot(gsekegg_res)

## End(Not run)

xiayh17/RNAseqStat documentation built on June 16, 2022, 11:51 a.m.