plot_deseq_gsea_list: Dotplot from a list of GSEA results

Description Usage Arguments Value

View source: R/rnaseq.R

Description

Dotplot from a list of GSEA results

Usage

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plot_deseq_gsea_list(
  gsea_list,
  p_co = 0.05,
  pattern = "HALLMARK_",
  dropNonSig = TRUE
)

Arguments

gsea_list

A list of tibble of GSEA results

p_co

A double - the cutoff of adjusted p-value. Default value is 0.05.

pattern

A string - the pattern to remove in the plot. Default value is "HALLMARK_".

dropNonSig

A logical - whether to drop non-significant pathways in the plot. Default value is TRUE.

Value

A ggplot2 plot


xmc811/xmcutil documentation built on June 4, 2021, 10:48 a.m.