plot_heatmap_vsd: Sample distance heatmap from vsd object
In xmc811/xmcutil: Bioinformatics data processing utilities
Description
Usage
Arguments
Value
Description
Sample distance heatmap from vsd object
Usage
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plot_heatmap_vsd(
vsd,
var,
pal = options("xmcutil.tripalette")[[1]][2],
dir = 1
)
Arguments
vsd
A vsd object
var
A string - the name of the variable matching metadata columns
pal
A string - palette name of RColorBrewer. Default value takes the palette set up in options('xmc.tripalette').
dir
An integer - 0 or 1, to adjust the direction of colors. Default value is 1.
Value
A heatmap
xmc811/xmcutil documentation built on June 4, 2021, 10:48 a.m.
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Description Usage Arguments Value
Description
Sample distance heatmap from vsd object
Usage
1 2 3 4 5 6 | plot_heatmap_vsd(
vsd,
var,
pal = options("xmcutil.tripalette")[[1]][2],
dir = 1
)
|
Arguments
vsd |
A vsd object |
var |
A string - the name of the variable matching metadata columns |
pal |
A string - palette name of |
dir |
An integer - |
Value
A heatmap
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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