plot_deseq_volcano: Volcano plot from DESeq2Results object

Description Usage Arguments Value

View source: R/rnaseq.R

Description

Volcano plot from DESeq2Results object

Usage

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plot_deseq_volcano(
  res,
  p_co = 0.05,
  lfc_co = 2,
  p_plot_lim = 5,
  lfc_plot_lim = 5
)

Arguments

res

A DESeq2Results object

p_co

A double - the cutoff of adjusted p-value. Default values is 0.05.

lfc_co

A double - the cutoff of log2 fold change. Default values is 2.

p_plot_lim

A double - the y-limit of -log10 adjusted p-value. Default value is 5.

lfc_plot_lim

A double - the x-limit of log2 fold change plot. Default value is 5.

Value

A ggplot2 plot


xmc811/xmcutil documentation built on June 4, 2021, 10:48 a.m.