RemoveDoublets.All.Rate: Remove doublets for multiple methods on multiple datasets and...

In xnnba1984/DoubletCollection: Find doublets in scRNA-seq data

Remove doublets for multiple methods on multiple datasets and doublet rates

Description

Remove doublets based on identified doublet indices for different doublet-detection methods on multiple datasets and doublet rates.

Usage

RemoveDoublets.All.Rate(count.list, label.list, doublet.list.all.rate)

Arguments

count.list	A list of scRNA-seq count matrices.
label.list	A list doublet annoations (0/1).
doublet.list.all.rate	A list of identified doublet indices of different methods on multiple datasets and doublet rates.

Value

A list of scRNA-seq count matrices and doublet annotations after removing doublets based on multiple doublet rates.

Examples

doublet.list.all.rate <- FindDoublets.All.Rate(score.list.all = score.list.all, rates = seq(0.01, 0.25, 0.01))

xnnba1984/DoubletCollection documentation built on Dec. 10, 2022, 11:13 a.m.