RemoveDoublets.all: Remove doublets for multiple methods on multiple datasets

In xnnba1984/DoubletCollection: Find doublets in scRNA-seq data

Remove doublets for multiple methods on multiple datasets

Description

Remove doublets based on identified doublet indices for different doublet-detection methods on multiple datasets.

Usage

RemoveDoublets.all(count.list, label.list, doublet.list.all)

Arguments

count.list	A list of scRNA-seq count matrices.
label.list	A list doublet annoations (0/1).
doublet.list.all	A list of identified doublet indices of different methods on multiple datasets.

Value

A list of scRNA-seq count matrices and doublet annotations after removing doublets.

Examples

data.removal.all <- RemoveDoublets.All(count.list=count.list, label.list=label.list, doublet.list.all=doublet.list.all)

xnnba1984/DoubletCollection documentation built on Dec. 10, 2022, 11:13 a.m.