GOGOsearch: GOGOsearch function search the genes of interest in a GO...
In xpingli/GOGOgadget: construct database for your organism and pick matching from your analysis sets.
Description
Usage
Author(s)
Examples
Description
GOGOsearch function helps you find the specific genes of interest. It takes 5 arguments. "scav": input a scav dataset processed by 'GOGOscavenger funciton'. "help": logical if you are not sure what terms your data set has. "view": "full" gives all the regulation pattern in each GO type (MF, BP, CC, PC); "search" will not show the full view results. "goterm": the GO terms you are interested to look into in the dataset. "gotype": the four gotypes to choose from (MF, BP, CC, PC), default is PC)
Usage
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GOGOsearch(scav, help = T, view = c("full", "search"), goterm,
gotype = "PC", ...)
Author(s)
Xiaoping Li
Examples
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5
## Not run:
GOGOsearch(scav, help = T, view = "full", "transporter", gotype = "MF")
## End(Not run)
xpingli/GOGOgadget documentation built on May 4, 2019, 1:25 p.m.
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Description Usage Author(s) Examples
Description
GOGOsearch function helps you find the specific genes of interest. It takes 5 arguments. "scav": input a scav dataset processed by 'GOGOscavenger funciton'. "help": logical if you are not sure what terms your data set has. "view": "full" gives all the regulation pattern in each GO type (MF, BP, CC, PC); "search" will not show the full view results. "goterm": the GO terms you are interested to look into in the dataset. "gotype": the four gotypes to choose from (MF, BP, CC, PC), default is PC)
Usage
1 2 | GOGOsearch(scav, help = T, view = c("full", "search"), goterm,
gotype = "PC", ...)
|
Author(s)
Xiaoping Li
Examples
1 2 3 4 5 | ## Not run:
GOGOsearch(scav, help = T, view = "full", "transporter", gotype = "MF")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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