rm.cgsuffix: Remove suffix from CpG names and combine duplicated CpGs
In xuz1/ENmix: Quality control and analysis tools for Illumina DNA methylation BeadChip
rm.cgsuffix R Documentation
Remove suffix from CpG names and combine duplicated CpGs
Description
Remove suffix from CpG names for EPIC v2 BeadChips and combined values for duplicated CpGs
Usage
rm.cgsuffix(datMeth)
Arguments
datMeth
A methlation data matrix with row names for CpG id
Details
Remove suffix from CpG names for EPIC v2 BeadChips and combined values for duplicated CpGs
Value
A matrix with number of rows equal or less than input data.
Author(s)
Zongli Xu
Examples
#beta matrix with row for CpGs and column for samples
beta2=rm.cgsuffix(beta)
xuz1/ENmix documentation built on Aug. 5, 2023, 7:11 a.m.
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| rm.cgsuffix | R Documentation |
Remove suffix from CpG names and combine duplicated CpGs
Description
Remove suffix from CpG names for EPIC v2 BeadChips and combined values for duplicated CpGs
Usage
rm.cgsuffix(datMeth)
Arguments
datMeth |
A methlation data matrix with row names for CpG id |
Details
Remove suffix from CpG names for EPIC v2 BeadChips and combined values for duplicated CpGs
Value
A matrix with number of rows equal or less than input data.
Author(s)
Zongli Xu
Examples
#beta matrix with row for CpGs and column for samples
beta2=rm.cgsuffix(beta)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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