iDEA-package: Integrative Differential Expression and Gene Set Enrichment...

iDEA-packageR Documentation

Integrative Differential Expression and Gene Set Enrichment Analysis

Description

iDEA is a new method for analyzing single-cell RNAseq data. It integrates differential expression (DE) analysis and gene set enrichment analysis (GSEA) into a joint statistical framework, providing substantial power gains for both analytic tasks. iDEA requires gene-level summary statistics in terms of fold change/effect size estimates and their standard errors as input, which can be obtained using any existing single-cell RNAseq DE methods.

Package Content

Index: This package was not yet installed at build time.

Maintainer

Shiquan Sun <shiquans@umich.edu>, Ying Ma <yingma@umich.edu>

Author(s)

Shiquan Sun, Ying Ma


xzhoulab/iDEA documentation built on Oct. 8, 2022, 8:54 a.m.