knitr::opts_knit$set(root.dir=normalizePath('../'))
knitr::opts_knit$set(warnings = TRUE, include=TRUE, echo=TRUE)
library("huskeR")

Test run_aspera

#?run_aspera

inputdf <- data.frame(bedfile1="BedFile1", bedfile2="Bedfile2", bedfile3="bfile3",
                      gz.lix="nam.gz.lix", genome_kinship="genome.kinship", res_kinship="res.kinship")
inputdf

run_VCAP(inputdf, email = NULL, runinfo = c(FALSE, "jclarke", 1, "10G", "16:00:00"))


yangjl/huskeR documentation built on Sept. 2, 2021, 5:38 a.m.