Files in yilinwu123/precision1
PaiREd miCrorna sImulation on Study desIgn for mOlecular classificatioN

.DS_Store
.RData
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
PRECISION.array.Rproj
R/amplify.handling.effect.R R/blocking.design.R R/calc.confounding.level.R R/clanc.R R/clanc.intcv.R R/clanc.predict.R R/confounding.design.R R/create.storage.R R/data.description.R R/dlda.intcv.R R/dlda.predict.R R/estimate.biological.effect.R R/estimate.handling.effect.R R/extract.precision.error.R R/knn.intcv.R R/knn.predict.R R/lasso.intcv.R R/lasso.predict.R R/limma.pbset.R R/med.norm.R R/med.sum.pbset.R R/nn.norm.R R/pam.intcv.R R/pam.predict.R R/per.unipbset.truncate.R R/plot.precision.R R/plot.precision.multiclass.R R/precision.simulate.R R/precision.simulate.class.R R/precision.simulate.multiclass.R R/quant.norm.R R/ranfor.intcv.R R/ranfor.predict.R R/reduce.signal.R R/rehybridize.R R/stratification.design.R R/svm.intcv.R R/svm.predict.R R/switch.classifier.funcs.R R/switch.classifier.funcs.class.R R/switch.norm.funcs.R R/switch.norm.funcs.flex.R R/tabulate.ext.err.func.R R/trycatch.func.R R/uni.handled.simulate.R R/vs.norm.R R/xgboost.intcv.R README.md
_pkgdown.yml
build/vignette.rds
data/nuhdata.pl.rda
data/random.generate.data.R
data/uhdata.pl.rda
docs/404.html
docs/articles/index.html
docs/articles/my-vignette.html
docs/articles/my-vignette_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/my-vignette_files/figure-html/amplify.handling.effect-1.png
docs/articles/my-vignette_files/figure-html/amplify.handling.effect-2.png
docs/articles/my-vignette_files/figure-html/amplify.handling.effect-3.png
docs/articles/my-vignette_files/figure-html/amplify.handling.effect-4.png
docs/articles/my-vignette_files/figure-html/amplify.handling.effect-5.png
docs/articles/my-vignette_files/figure-html/error plot-1.png
docs/articles/my-vignette_files/figure-html/precision.vis-1.png
docs/articles/my-vignette_files/figure-html/reduce.signal.fig-1.png
docs/articles/my-vignette_files/figure-html/study.design.fig-1.png
docs/authors.html
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.0/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/amplify.handling.effect.html
docs/reference/blocking.design.html
docs/reference/calc.confounding.level.html
docs/reference/clanc.intcv.html
docs/reference/clanc.predict.html
docs/reference/confounding.design.html
docs/reference/create.storage.html
docs/reference/dlda.intcv.html
docs/reference/dlda.predict.html
docs/reference/estimate.biological.effect.html
docs/reference/estimate.handling.effect.html
docs/reference/extract.precision.error.html
docs/reference/index.html
docs/reference/knn.intcv.html
docs/reference/knn.predict.html
docs/reference/lasso.intcv.html
docs/reference/lasso.predict.html
docs/reference/limma.pbset.html
docs/reference/med.norm.html
docs/reference/med.sum.pbset.html
docs/reference/nuhdata.pl.html
docs/reference/pam.intcv.html
docs/reference/pam.predict.html
docs/reference/per.unipbset.truncate.html
docs/reference/plot.precision.html
docs/reference/plot.precision.multiclass.html
docs/reference/precision.simulate.class.html
docs/reference/precision.simulate.html
docs/reference/precision.simulate.multiclass.html
docs/reference/quant.norm.html
docs/reference/ranfor.intcv-1.png
docs/reference/ranfor.intcv.html
docs/reference/ranfor.predict-1.png
docs/reference/ranfor.predict.html
docs/reference/reduce.signal.html
docs/reference/rehybridize.html
docs/reference/stratification.design.html
docs/reference/svm.intcv.html
docs/reference/svm.predict.html
docs/reference/switch.classifier.funcs.class.html
docs/reference/switch.classifier.funcs.html
docs/reference/switch.norm.funcs.flex.html
docs/reference/switch.norm.funcs.html
docs/reference/tabulate.ext.err.func.html
docs/reference/uhdata.pl.html
docs/reference/uni.handled.simulate.html
docs/reference/vs.norm.html
docs/search.json
docs/sitemap.xml
man/amplify.handling.effect.Rd man/blocking.design.Rd man/calc.confounding.level.Rd man/clanc.intcv.Rd man/clanc.predict.Rd man/confounding.design.Rd man/create.storage.Rd man/dlda.intcv.Rd man/dlda.predict.Rd man/estimate.biological.effect.Rd man/estimate.handling.effect.Rd man/extract.precision.error.Rd man/knn.intcv.Rd man/knn.predict.Rd man/lasso.intcv.Rd man/lasso.predict.Rd man/limma.pbset.Rd man/med.norm.Rd man/med.sum.pbset.Rd man/nuhdata.pl.Rd man/pam.intcv.Rd man/pam.predict.Rd man/per.unipbset.truncate.Rd man/plot.precision.Rd man/plot.precision.multiclass.Rd man/precision.simulate.Rd man/precision.simulate.class.Rd man/precision.simulate.multiclass.Rd man/quant.norm.Rd man/ranfor.intcv.Rd man/ranfor.predict.Rd man/reduce.signal.Rd man/rehybridize.Rd man/stratification.design.Rd man/svm.intcv.Rd man/svm.predict.Rd man/switch.classifier.funcs.Rd man/switch.classifier.funcs.class.Rd man/switch.norm.funcs.Rd man/switch.norm.funcs.flex.Rd man/tabulate.ext.err.func.Rd man/uhdata.pl.Rd man/uni.handled.simulate.Rd man/vs.norm.Rd man/xgboost.intcv.Rd vignettes/my-vignette.Rmd
vignettes/vignette.RData
yilinwu123/precision1 documentation built on June 28, 2022, 2:53 a.m.