tests/testthat/_snaps/two-group-test.md

In yiluheihei/microbiomeMarker: microbiome biomarker analysis toolkit

test two group result

Code
  mm_welch
Output
  microbiomeMarker-class inherited from phyloseq-class
  normalization method:              [ TSS ]
  microbiome marker identity method: [ welch.test ]
  marker_table() Marker Table:       [ 3 microbiome markers with 5 variables ]
  otu_table()    OTU Table:          [ 244 taxa and  39 samples ]
  sample_data()  Sample Data:        [ 39 samples by  9 sample variables ]
  tax_table()    Taxonomy Table:     [ 244 taxa by 1 taxonomic ranks ]

Code
  mm_t
Output
  microbiomeMarker-class inherited from phyloseq-class
  normalization method:              [ TSS ]
  microbiome marker identity method: [ t.test ]
  marker_table() Marker Table:       [ 2 microbiome markers with 5 variables ]
  otu_table()    OTU Table:          [ 244 taxa and  39 samples ]
  sample_data()  Sample Data:        [ 39 samples by  9 sample variables ]
  tax_table()    Taxonomy Table:     [ 244 taxa by 1 taxonomic ranks ]

yiluheihei/microbiomeMarker documentation built on Nov. 5, 2023, 7:19 a.m.