transformData: transformData

In ypriverol/pIR: pIR: Estimating Isoelectric Point (pI) of Peptide and Proteins from Amino Acid Sequence.

Description

This function transform a new data (dataframe) using center and scale transformation. This transformation is necesary previous to use svm method.

Usage

transformData(instances = instance, trainingSet = "default")

Arguments

instances	The data to be transformed
trainingSet	The training set used to apply transformation.
defaultTrainingSet	A flag to get the training set used in the transformation (if TRUE, default training set will be used)

Details

If trainingSet flag is not "default", "heller" or "branca", the current data will be used to apply the transformation requeried

before use a SVM model, the set supply must contains the following variables: calibrated, expasy and aaindex.

ypriverol/pIR documentation built on May 4, 2019, 5:33 p.m.