seqNumAllele: Number of alleles
In zhengxwen/SeqArray: Data Management of Large-Scale Whole-Genome Sequence Variant Calls
seqNumAllele R Documentation
Number of alleles
Description
Returns the numbers of alleles for each site.
Usage
seqNumAllele(gdsfile)
Arguments
gdsfile
a SeqVarGDSClass object
Value
The numbers of alleles for each site.
Author(s)
Xiuwen Zheng
See Also
seqAlleleFreq, seqMissing
Examples
# the GDS file
(gds.fn <- seqExampleFileName("gds"))
# display
f <- seqOpen(gds.fn)
table(seqNumAllele(f))
# close the GDS file
seqClose(f)
zhengxwen/SeqArray documentation built on Dec. 14, 2024, 8:36 p.m.
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| seqNumAllele | R Documentation |
Number of alleles
Description
Returns the numbers of alleles for each site.
Usage
seqNumAllele(gdsfile)
Arguments
gdsfile |
a |
Value
The numbers of alleles for each site.
Author(s)
Xiuwen Zheng
See Also
seqAlleleFreq, seqMissing
Examples
# the GDS file
(gds.fn <- seqExampleFileName("gds"))
# display
f <- seqOpen(gds.fn)
table(seqNumAllele(f))
# close the GDS file
seqClose(f)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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