last.exexjun.pos: Get position of last exon-exon junction
In zhiyuanhu/masonmd: Make Sense of Nonsense-Mediated Decay
Description
Usage
Arguments
Details
Value
Description
last.exexjun.pos gets position of last exon-exon junction.
Usage
1
last.exexjun.pos(mut_exjun)
Arguments
mut_exjun
a numeric vector that identifies the positions of exon-exon junctions
in the coding sequence. It is the output of the function get_mut_seq_exjun in masonmd package.
Details
Get position of last exon-exon junction.
Value
A list containing two entries:
last_exon_exon_junction numeric; position of last exon-exon junction.
note note on weather the mutation affects splice sites or the gene has only one exon.
zhiyuanhu/masonmd documentation built on May 4, 2019, 11:22 p.m.
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Description Usage Arguments Details Value
Description
last.exexjun.pos gets position of last exon-exon junction.
Usage
1 | last.exexjun.pos(mut_exjun)
|
Arguments
mut_exjun |
a numeric vector that identifies the positions of exon-exon junctions
in the coding sequence. It is the output of the function |
Details
Get position of last exon-exon junction.
Value
A list containing two entries:
last_exon_exon_junctionnumeric; position of last exon-exon junction.notenote on weather the mutation affects splice sites or the gene has only one exon.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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