API for zhongmicai/complexHeatmap
Make Complex Heatmaps

Global functions
%v% Man page
+.AdditiveUnit Man page
AdditiveUnit Man page
AdditiveUnit-class Man page
AnnotationFunction Man page
AnnotationFunction-class Man page
ColorMapping Man page
ColorMapping-class Man page
ComplexHeatmap-package Man page
Extract.AnnotationFunction Man page
Extract.Heatmap Man page
Extract.HeatmapAnnotation Man page
Extract.HeatmapList Man page
Extract.SingleAnnotation Man page
Extract.comb_mat Man page
Heatmap Man page
Heatmap-class Man page
HeatmapAnnotation Man page
HeatmapAnnotation-class Man page
HeatmapList Man page
HeatmapList-class Man page
Legend Man page
Legends Man page
Legends-class Man page
SingleAnnotation Man page
SingleAnnotation-class Man page
UpSet Man page
[.AnnotationFunction Man page
[.Heatmap Man page
[.HeatmapAnnotation Man page
[.HeatmapList Man page
[.SingleAnnotation Man page
[.comb_mat Man page
add.AdditiveUnit Man page
add_heatmap Man page
add_heatmap,Heatmap-method Man page
add_heatmap,HeatmapAnnotation-method Man page
add_heatmap,HeatmapList-method Man page
adjust_dend_by_x Man page
adjust_heatmap_list Man page
adjust_heatmap_list,HeatmapList-method Man page
anno_barplot Man page
anno_block Man page
anno_boxplot Man page
anno_density Man page
anno_empty Man page
anno_histogram Man page
anno_horizon Man page
anno_image Man page
anno_joyplot Man page
anno_lines Man page
anno_link Man page
anno_mark Man page
anno_oncoprint_barplot Man page
anno_points Man page
anno_simple Man page
anno_summary Man page
anno_text Man page
anno_zoom Man page
annotation_axis_grob Man page
annotation_legend_size Man page
annotation_legend_size,HeatmapList-method Man page
c.HeatmapAnnotation Man page
cluster_within_group Man page
color_mapping_legend Man page
color_mapping_legend,ColorMapping-method Man page
columnAnnotation Man page
column_dend Man page
column_dend,Heatmap-method Man page
column_dend,HeatmapList-method Man page
column_order Man page
column_order,Heatmap-method Man page
column_order,HeatmapList-method Man page
comb_degree Man page
comb_name Man page
comb_size Man page
component_height Man page
component_height,Heatmap-method Man page
component_height,HeatmapList-method Man page
component_width Man page
component_width,Heatmap-method Man page
component_width,HeatmapList-method Man page
copy_all Man page
copy_all,AnnotationFunction-method Man page
copy_all,SingleAnnotation-method Man page
decorate_annotation Man page
decorate_column_dend Man page
decorate_column_names Man page
decorate_column_title Man page
decorate_dend Man page
decorate_dimnames Man page
decorate_heatmap_body Man page
decorate_row_dend Man page
decorate_row_names Man page
decorate_row_title Man page
decorate_title Man page
default_axis_param Man page
default_get_type Man page
dend_heights Man page
dend_xy Man page
dendrogramGrob Man page
densityHeatmap Man page
dim.Heatmap Man page
dist2 Man page
draw Man page
draw,AnnotationFunction-method Man page
draw,Heatmap-method Man page
draw,HeatmapAnnotation-method Man page
draw,HeatmapList-method Man page
draw,Legends-method Man page
draw,SingleAnnotation-method Man page
draw_annotation Man page
draw_annotation,Heatmap-method Man page
draw_annotation_legend Man page
draw_annotation_legend,HeatmapList-method Man page
draw_dend Man page
draw_dend,Heatmap-method Man page
draw_dimnames Man page
draw_dimnames,Heatmap-method Man page
draw_heatmap_body Man page
draw_heatmap_body,Heatmap-method Man page
draw_heatmap_legend Man page
draw_heatmap_legend,HeatmapList-method Man page
draw_heatmap_list Man page
draw_heatmap_list,HeatmapList-method Man page
draw_title Man page
draw_title,Heatmap-method Man page
draw_title,HeatmapList-method Man page
extract_comb Man page
getXY_in_parent_vp Man page
get_color_mapping_list Man page
get_color_mapping_list,HeatmapAnnotation-method Man page
get_legend_param_list Man page
get_legend_param_list,HeatmapAnnotation-method Man page
grid.annotation_axis Man page
grid.boxplot Man page
grid.dendrogram Man page
grid.draw.Legends Man page
heatmap_legend_size Man page
heatmap_legend_size,HeatmapList-method Man page
height.AnnotationFunction Man page
height.Heatmap Man page
height.HeatmapAnnotation Man page
height.HeatmapList Man page
height.Legends Man page
height.SingleAnnotation Man page
height<-.AnnotationFunction Man page
height<-.HeatmapAnnotation Man page
height<-.SingleAnnotation Man page
heightAssign.AnnotationFunction Man page
heightAssign.HeatmapAnnotation Man page
heightAssign.SingleAnnotation Man page
heightDetails.annotation_axis Man page
heightDetails.legend Man page
heightDetails.legend_body Man page
heightDetails.packed_legends Man page
ht_global_opt Man page
ht_opt Man page
is_abs_unit Man page
length.HeatmapAnnotation Man page
length.HeatmapList Man page
list_components Man page
list_to_matrix Man page
make_column_cluster Man page
make_column_cluster,Heatmap-method Man page
make_comb_mat Man page
make_layout Man page
make_layout,Heatmap-method Man page
make_layout,HeatmapList-method Man page
make_row_cluster Man page
make_row_cluster,Heatmap-method Man page
map_to_colors Man page
map_to_colors,ColorMapping-method Man page
max_text_height Man page
max_text_width Man page
merge_dendrogram Man page
names.HeatmapAnnotation Man page
names.HeatmapList Man page
names<-.HeatmapAnnotation Man page
namesAssign.HeatmapAnnotation Man page
ncol.Heatmap Man page
nobs.AnnotationFunction Man page
nobs.HeatmapAnnotation Man page
nobs.SingleAnnotation Man page
normalize_comb_mat Man page
nrow.Heatmap Man page
oncoPrint Man page
order.comb_mat Man page
packLegend Man page
pct_v_pct Man page
pindex Man page
prepare Man page
prepare,Heatmap-method Man page
print.comb_mat Man page
re_size Man page
re_size,HeatmapAnnotation-method Man page
restore_matrix Man page
rowAnnotation Man page
row_anno_barplot Man page
row_anno_boxplot Man page
row_anno_density Man page
row_anno_histogram Man page
row_anno_link Man page
row_anno_points Man page
row_anno_text Man page
row_dend Man page
row_dend,Heatmap-method Man page
row_dend,HeatmapList-method Man page
row_order Man page
row_order,Heatmap-method Man page
row_order,HeatmapList-method Man page
set_component_height Man page
set_component_height,Heatmap-method Man page
set_component_width Man page
set_component_width,Heatmap-method Man page
set_name Man page
set_size Man page
show Man page
show,AnnotationFunction-method Man page
show,ColorMapping-method Man page
show,Heatmap-method Man page
show,HeatmapAnnotation-method Man page
show,HeatmapList-method Man page
show,SingleAnnotation-method Man page
size.AnnotationFunction Man page
size.HeatmapAnnotation Man page
size.SingleAnnotation Man page
size<-.AnnotationFunction Man page
size<-.HeatmapAnnotation Man page
size<-.SingleAnnotation Man page
sizeAssign.AnnotationFunction Man page
sizeAssign.HeatmapAnnotation Man page
sizeAssign.SingleAnnotation Man page
smartAlign2 Man page
str.comb_mat Man page
subset_gp Man page
subset_matrix_by_row Man page
subset_vector Man page
summary.Heatmap Man page
summary.HeatmapList Man page
t.comb_mat Man page
test_alter_fun Man page
unify_mat_list Man page
upset_right_annotation Man page
upset_top_annotation Man page
width.AnnotationFunction Man page
width.Heatmap Man page
width.HeatmapAnnotation Man page
width.HeatmapList Man page
width.Legends Man page
width.SingleAnnotation Man page
width<-.AnnotationFunction Man page
width<-.HeatmapAnnotation Man page
width<-.SingleAnnotation Man page
widthAssign.AnnotationFunction Man page
widthAssign.HeatmapAnnotation Man page
widthAssign.SingleAnnotation Man page
widthDetails.annotation_axis Man page
widthDetails.legend Man page
widthDetails.legend_body Man page
widthDetails.packed_legends Man page
zhongmicai/complexHeatmap documentation built on May 7, 2019, 6:11 a.m.