anno_block: Block annotation

In zhongmicai/complexHeatmap: Make Complex Heatmaps

Description

Block annotation

Usage

anno_block(gp = gpar(), labels = NULL, labels_gp = gpar(), labels_rot = ifelse(which == "row", 90, 0),
    which = c("column", "row"), width = NULL, height = NULL)

Arguments

gp	Graphic parameters.
labels	Labels put on blocks.
labels_gp	Graphic parameters for labels.
labels_rot	Rotation for labels.
which	Is it a row annotation or a column annotation?
width	Width of the annotation. The value should be an absolute unit. Width is not allowed to be set for column annotation.
height	Height of the annotation. The value should be an absolute unit. Height is not allowed to be set for row annotation.

Details

The block annotation is used for representing slices. The length of all arguments should be 1 or the number of slices.

Value

An annotation function which can be used in HeatmapAnnotation.

See Also

https://jokergoo.github.io/ComplexHeatmap-reference/book/heatmap-annotations.html#block-annotation

Examples

Heatmap(matrix(rnorm(100), 10), 
    top_annotation = HeatmapAnnotation(foo = anno_block(gp = gpar(fill = 2:4),
        labels = c("group1", "group2", "group3"), labels_gp = gpar(col = "white"))),
    column_km = 3,
    left_annotation = rowAnnotation(foo = anno_block(gp = gpar(fill = 2:4),
        labels = c("group1", "group2", "group3"), labels_gp = gpar(col = "white"))),
    row_km = 3)

zhongmicai/complexHeatmap documentation built on May 7, 2019, 6:11 a.m.