DEGsEnrich: DEGsEnrich

In zhupinglab/Aodav: Advanced omics data analysis and visualization

Description

GO enrichment analysis for differentially expressed genes

Usage

DEGsEnrich(obj, fc = log(2), adj.p = 0.05, min.percent = 0.1,
  pval = NULL, term.key = "GO_Biological_Process_2018")

Arguments

obj	DEG matrix
fc	cutoff of fold change of gene expression to filter genes
adj.p	cutoff of adjusted p value to filter genes
min.percent	minimum percent of cells in any cluster expressed a gene
pval	use a specified p value to filter genes
term.key	term key of GO

Examples

## Not run: 
DEGsEnrich(obj)

## End(Not run)

zhupinglab/Aodav documentation built on June 10, 2019, 2:31 a.m.