viewMergeGO: viewMergeGO

In zhupinglab/Aodav: Advanced omics data analysis and visualization

Description

Merged visualization of GO enrichment for all cluster

Usage

viewMergeGO(obj, label, topN = 5, adjP = 0.05, deg.num = 3,
  term.key = "GO_Biological_Process_2018", groupOrder = names(obj))

Arguments

obj	enrichment obtained from function DEGs.enrich
label	stamp for output file name
topN	top terms to show
adjP	cutoff of adjusted p value to select terms
deg.num	minimum number of DEGs in each enriched term
term.key	term key of GO

Examples

## Not run: 
viewMergeGO(obj, label="test")

## End(Not run)

zhupinglab/Aodav documentation built on June 10, 2019, 2:31 a.m.