viewGO: viewGO

In zhupinglab/Aodav: Advanced omics data analysis and visualization

Description

Visualization of GO enrichment for each cluster

Usage

viewGO(obj, tag, iterm.num = 10, deg.num = 3,
  term.key = "GO_Biological_Process_2018", adjust.Pcut = 0.05)

Arguments

obj	enrichment obtained from function DEGs.enrich
tag	stamp for output file name
deg.num	minimum number of DEGs in each enriched term
term.key	term key of GO
adjust.Pcut	cutoff of adjusted p value to filter genes

Examples

## Not run: 
viewGO(obj, tag="test")

## End(Not run)

zhupinglab/Aodav documentation built on June 10, 2019, 2:31 a.m.