matchLSjunc: matchLSjunc match the junction site between long reads and...
In zhushijia/STAR2bSMRT: STARlong and STARshort based Single Molecule Real Time Iso-Seq analysis
Description
Usage
Arguments
Value
Description
matchLSjunc
match the junction site between long reads and short reads
Usage
1
matchLSjunc(LRjunc, SRjunc)
Arguments
LRjunc
a list of data frame, indicating the splicing junction sites
obtained from long reads
SRjunc
a list of data frame, indicating the splicing junction sites
obtained from short reads
Value
a list of data frame for the junction sites of each chromosome. The
data frame indicates the locations of junction sites and the
correspoding read count from both long and short reads
zhushijia/STAR2bSMRT documentation built on Dec. 18, 2019, 7:37 a.m.
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Description Usage Arguments Value
Description
matchLSjunc match the junction site between long reads and short reads
Usage
1 | matchLSjunc(LRjunc, SRjunc)
|
Arguments
LRjunc |
a list of data frame, indicating the splicing junction sites obtained from long reads |
SRjunc |
a list of data frame, indicating the splicing junction sites obtained from short reads |
Value
a list of data frame for the junction sites of each chromosome. The data frame indicates the locations of junction sites and the correspoding read count from both long and short reads
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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