count_table.filtered.partial: Example count table of GTEx RNA-seq experiment, fitered by...
In zshao1/ERSSA: Empirical RNA-seq Sample Size Analysis
count_table.filtered.partial R Documentation
Example count table of GTEx RNA-seq experiment, fitered by count_filter
function
Description
A filtered version of the example count_table.partial.
Contains 974 genes that passed the filter. Used for testing purposes and
to shorten run time.
References
https://jhubiostatistics.shinyapps.io/recount/
Melé, Marta, Pedro G. Ferreira, Ferran Reverter, David S. DeLuca, Jean
Monlong, Michael Sammeth, Taylor R. Young, et al. “The Human Transcriptome
across Tissues and Individuals.” Science 348, no. 6235 (May 8, 2015):
660–65. https://doi.org/10.1126/science.aaa0355.
Collado-Torres, Leonardo, Abhinav Nellore, Kai Kammers, Shannon E. Ellis,
Margaret A. Taub, Kasper D. Hansen, Andrew E. Jaffe, Ben Langmead, and
Jeffrey T. Leek. “Reproducible RNA-Seq Analysis Using Recount2.” Nature
Biotechnology 35, no. 4 (April 2017): 319–21.
https://doi.org/10.1038/nbt.3838.
zshao1/ERSSA documentation built on July 19, 2023, 9:20 p.m.
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| count_table.filtered.partial | R Documentation |
Example count table of GTEx RNA-seq experiment, fitered by count_filter function
Description
A filtered version of the example count_table.partial. Contains 974 genes that passed the filter. Used for testing purposes and to shorten run time.
References
https://jhubiostatistics.shinyapps.io/recount/
Melé, Marta, Pedro G. Ferreira, Ferran Reverter, David S. DeLuca, Jean Monlong, Michael Sammeth, Taylor R. Young, et al. “The Human Transcriptome across Tissues and Individuals.” Science 348, no. 6235 (May 8, 2015): 660–65. https://doi.org/10.1126/science.aaa0355.
Collado-Torres, Leonardo, Abhinav Nellore, Kai Kammers, Shannon E. Ellis, Margaret A. Taub, Kasper D. Hansen, Andrew E. Jaffe, Ben Langmead, and Jeffrey T. Leek. “Reproducible RNA-Seq Analysis Using Recount2.” Nature Biotechnology 35, no. 4 (April 2017): 319–21. https://doi.org/10.1038/nbt.3838.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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