count_table.full: Example count table of GTEx RNA-seq experiment

count_table.fullR Documentation

Example count table of GTEx RNA-seq experiment

Description

Count table generated using data downloaded from Recount2 website with processed Raw GTEx dataset. Table has samples on columns and genes on rows. Contains 10 samples each from heart and muscle.

References

https://jhubiostatistics.shinyapps.io/recount/

Melé, Marta, Pedro G. Ferreira, Ferran Reverter, David S. DeLuca, Jean Monlong, Michael Sammeth, Taylor R. Young, et al. “The Human Transcriptome across Tissues and Individuals.” Science 348, no. 6235 (May 8, 2015): 660–65. https://doi.org/10.1126/science.aaa0355.

Collado-Torres, Leonardo, Abhinav Nellore, Kai Kammers, Shannon E. Ellis, Margaret A. Taub, Kasper D. Hansen, Andrew E. Jaffe, Ben Langmead, and Jeffrey T. Leek. “Reproducible RNA-Seq Analysis Using Recount2.” Nature Biotechnology 35, no. 4 (April 2017): 319–21. https://doi.org/10.1038/nbt.3838.


zshao1/ERSSA documentation built on July 19, 2023, 9:20 p.m.