mojitoo: mojitoo a bunch of dimensions

In CostaLab/MOJITOO: MOJITOO: (M)ulti-m(O)dal (J)oint (I)ntegra(T)ion of c(O)mp(O)nents

mojitoo a bunch of dimensions

Description

This function allows you to integrate multi-omics dim-reductions

Usage

mojitoo(object, ...)

## S3 method for class 'Seurat'
mojitoo(
  object = NULL,
  reduction.list = list(),
  dims.list = list(),
  reduction.name = "mojitoo",
  is.reduction.center = F,
  is.reduction.scale = F,
  fdr.method = "BH",
  corr.pval = 0.05,
  keep_separated_reductions = F,
  ...
)

Arguments

object	Seurat object
reduction.list	reduction list
dims.list	dims vector list
reduction.name	reduction name
is.reduction.center	bool if center the reduction
is.reduction.scale	bool if scale the reduction
fdr.method	fdr method, default BH
corr.pval	correlation test 0.05
keep_separated_reductions	bool if keep separated reductions

Value

The object with mojitoo reduction

Examples

mojitoo()

CostaLab/MOJITOO documentation built on Oct. 28, 2024, 10:42 a.m.