Description Usage Arguments Value Author(s) See Also Examples
Obtain KEGG pathway titles
1 | keggPathwayNames(organism = "hsa", updateCache = FALSE, verbose = TRUE)
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organism |
organism code as defined by KEGG |
updateCache |
re-download KEGG data |
verbose |
show progress of downloading and parsing |
A named vector of pathway titles. The names of the vector are the pathway KEGG IDs.
Calin Voichita and Sorin Draghici
1 2 3 4 5 6 7 | kpn <- keggPathwayNames("hsa")
# to update the pathway cache for human run:
# kpn <- keggPathwayNames("hsa", updateCache = TRUE)
# this is time consuming and depends on the available bandwidth.
head(kpn)
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