Files in ROntoTools
R Onto-Tools suite
NEWS
NAMESPACE
DESCRIPTION
LICENSE
build/vignette.rds
R/pDisPathway-utils.R
R/summary.pDisRes.R
R/pDisExpress.R
R/AllGenerics.R
R/nodeWeights-methods.R
R/utils.R
R/Summary-methods.R
R/summary.peRes.R
R/graphWeights.R
R/renderInfo-methods.R
R/pathwayExpress.R
R/plot-methods.R
R/AllClasses.R
R/pePathway-utils.R
R/keggDataREST.R
vignettes/rontotools.bib
vignettes/rontotools.Rnw
man/pePathway-class.Rd
man/pDis.Rd
man/pDisPathway-class.Rd
man/keggPathwayGraphs.Rd
man/pe.Rd
man/alphaMLG.Rd
man/compute.normalInv.Rd
man/subGraphByNodeType.Rd
man/peRes-class.Rd
man/compute.fisher.Rd
man/Summary-peRes-method.Rd
man/setEdgeWeights.Rd
man/summary.pDisRes.Rd
man/nodeWeights.Rd
man/alpha1MR.Rd
man/peEdgeRenderInfo.Rd
man/plot.peRes-methods.Rd
man/plot.pePathway-methods.Rd
man/keggPathwayNames.Rd
man/Summary-pDisRes-method.Rd
man/KEGGpathway2Graph.Rd
man/peNodeRenderInfo.Rd
man/pDisRes-class.Rd
man/summary.peRes.Rd
man/setNodeWeights.Rd
tests/runTests.R
inst/doc/rontotools.pdf
inst/doc/rontotools.R
inst/doc/rontotools.Rnw
inst/extdata/kpgDefault.RData
inst/extdata/KEGGRESTunparsed_hsa.RData
inst/extdata/E-GEOD-21942.topTable.RData
inst/unitTests/test_nodeWeights.R
inst/unitTests/test_pe.R
inst/unitTests/test_alpha.R
inst/unitTests/test_graphWeights.R
