which.edge: Identifies Edges of a Tree
In ape: Analyses of Phylogenetics and Evolution
which.edge R Documentation
Identifies Edges of a Tree
Description
This function identifies the edges that belong to a group (possibly
non-monophyletic) specified as a set of tips.
Usage
which.edge(phy, group)
Arguments
phy
an object of class "phylo".
group
a vector of mode numeric or character specifying the tips
for which the edges are to be identified.
Details
The group of tips specified in ‘group’ may be non-monophyletic
(paraphyletic or polyphyletic), in which case all edges from the tips
to their most recent common ancestor are identified.
The identification is made with the indices of the rows of the matrix
‘edge’ of the tree.
Value
a numeric vector.
Author(s)
Emmanuel Paradis
See Also
bind.tree, drop.tip, root
ape documentation built on May 29, 2024, 10:50 a.m.
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| which.edge | R Documentation |
Identifies Edges of a Tree
Description
This function identifies the edges that belong to a group (possibly non-monophyletic) specified as a set of tips.
Usage
which.edge(phy, group)
Arguments
phy |
an object of class |
group |
a vector of mode numeric or character specifying the tips for which the edges are to be identified. |
Details
The group of tips specified in ‘group’ may be non-monophyletic (paraphyletic or polyphyletic), in which case all edges from the tips to their most recent common ancestor are identified.
The identification is made with the indices of the rows of the matrix ‘edge’ of the tree.
Value
a numeric vector.
Author(s)
Emmanuel Paradis
See Also
bind.tree, drop.tip, root
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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