clean: Does some rudimentary cleaning of an AFLP object.

In AFLP: Analysis of AFLP data

Description

Does some rudimentary cleaning of an AFLP object. Mainly used to do get a clean object prior to normalisation.

Usage

  clean(data)

Arguments

data	An AFLP object

Value

A cleaned version of data

Author(s)

Thierry Onkelinx [e-mail], Paul Quataert

See Also

normalise

Examples

data(TiliaDesign)
 TiliaC <- as.AFLP(TiliaDesign)
 TiliaC <- readSAGA(
   system.file("extdata", "Tilia_bandvaluespc1", package = "AFLP"),
   add.to = TiliaC)
 TiliaC <- readSAGA(
   system.file("extdata", "Tilia_bandvaluespc2", package = "AFLP"),
   add.to = TiliaC)
 TiliaC <- readSAGA(
   system.file("extdata", "Tilia_bandvaluespc3", package = "AFLP"),
   add.to = TiliaC)
 TiliaC <- readSAGA(
   system.file("extdata", "Tilia_bandvaluespc4", package = "AFLP"),
   add.to = TiliaC)
 clean(TiliaC)

AFLP documentation built on May 2, 2019, 6:13 p.m.