Description Usage Arguments Value Author(s) See Also
Read fluorescence data from fsa files.
1 2 3 |
files |
A vector of filenames. Can be a relative or an absolute path. |
path |
The base path for the filenames. Defaults to the working directory. |
dye |
A vector with the names of the dyes used for the data. |
SizeStandard |
A numeric vector with basepairs of the size standard. |
Breaks |
A named list with the breaks used for binning the fluorescence. If missing the breaks are estimated by read.fsa.bins() |
Range |
A numeric vector of length 2 with the lower and upper limit of the desired markers (in number of base pairs). |
binwidth |
The desired width of the bins. |
SNR |
Maximum signal-to-noise ratio for peaks of the size standard. Used to ignore unwanted very strong peaks. |
verbose |
Print the name of each file when processing it. Useful for tracking progress. |
A data.frame with 5 variables: Filename, Dye, Marker, Binwidth and Fluorescence.
Thierry Onkelinx Thierry.Onkelinx@inbo.be, Paul Quataert
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