BayesFactor: Computation of Bayes factors for common designs

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The BayesFactor package is a suite of functions for computing various Bayes factors for simple designs, including the one- and two-sample designs, one-way designs, general ANOVA designs, and linear regression.

Author
Richard D. Morey, Jeffrey N. Rouder
Date of publication
2013-04-12 08:32:19
Maintainer
Richard D. Morey <richarddmorey@gmail.com>
License
GPL-2
Version
0.9.4
URLs

View on R-Forge

Man pages

anovaBF
Function to compute Bayes factors for ANOVA designs
as.BFBayesFactor
Function to coerce objects to the BFBayesFactor class
BayesFactor-package
Functions to compute Bayes factor hypothesis tests for common...
BFBayesFactor-class
General S4 class for representing multiple Bayes factor model...
BFBayesFactorList-class
General S4 class for representing a collection of Bayes...
BFInfo
Prints the version information for the BayesFactor package
BFManual
Opens the HTML manual for the BayesFactor package
compare-methods
Compare two models, with respect to some data
extractBF-methods
Extract the Bayes factor from an object
generalTestBF
Function to compute Bayes factors for general designs
linearReg.R2stat
Use R^2 statistic to compute Bayes factor for regression...
lmBF
Function to compute Bayes factors for specific linear models
logMeanExpLogs
Functions to compute the logarithm of the mean (and...
model-classes
General S4 classes for representing models for comparison
nWayAOV
Use ANOVA design matrix to compute Bayes factors or sample...
oneWayAOV.Fstat
Use F statistic to compute Bayes factor for balanced one-way...
options-BayesFactor
options() for package BayesFactor
plot.BFBayesFactor
Plot a Bayes factor object
plot.BFBayesFactorTop
Plot a Bayes factor top-down object
posterior-methods
Sample from the posterior distribution of one of several...
puzzles
Puzzle completion times from Hays (1994)
recompute-methods
Take an object and redo the computation (useful for sampling)
regressionBF
Function to compute Bayes factors for regression designs
ttestBF
Function for Bayesian analysis of one- and two-sample designs
ttest.tstat
Use t statistic to compute Bayes factor for one- and two-...

Files in this package

BayesFactor/.Rinstignore
BayesFactor/DESCRIPTION
BayesFactor/NAMESPACE
BayesFactor/NEWS
BayesFactor/R
BayesFactor/R/BayesFactorPCL-package.R
BayesFactor/R/aaClasses.R
BayesFactor/R/aaGenerics.R
BayesFactor/R/anovaBF-utility.R
BayesFactor/R/anovaBF.R
BayesFactor/R/checking.R
BayesFactor/R/common.R
BayesFactor/R/debug.R
BayesFactor/R/gaussApproxAOV.R
BayesFactor/R/generalTest-utility.R
BayesFactor/R/generalTestBF.R
BayesFactor/R/linearReg_R2stat.R
BayesFactor/R/lmBF.R
BayesFactor/R/logMean.R
BayesFactor/R/manual.R
BayesFactor/R/methods-BFBayesFactor.R
BayesFactor/R/methods-BFBayesFactorList.R
BayesFactor/R/methods-BFBayesFactorTop.R
BayesFactor/R/methods-BFlinearModel-compare.R
BayesFactor/R/methods-BFmodel.R
BayesFactor/R/methods-BFmodelSample.R
BayesFactor/R/nWayAOV-utility.R
BayesFactor/R/nWayAOV.R
BayesFactor/R/onAttach.R
BayesFactor/R/oneWayAOV-utility.R
BayesFactor/R/oneWayAOV_Fstat.R
BayesFactor/R/plot-BFBayesFactor.R
BayesFactor/R/plot-BFBayesFactorTop.R
BayesFactor/R/regressionBF-utility.R
BayesFactor/R/regressionBF.R
BayesFactor/R/ttest-utility.R
BayesFactor/R/ttestBF.R
BayesFactor/R/ttest_tstat.R
BayesFactor/R/version.R
BayesFactor/data
BayesFactor/data/puzzles.rda
BayesFactor/inst
BayesFactor/inst/SVN_VERSION
BayesFactor/inst/doc
BayesFactor/inst/doc/BayesFactor-intro.R
BayesFactor/inst/doc/Makefile
BayesFactor/inst/doc/extra
BayesFactor/inst/doc/extra/logo.png
BayesFactor/inst/doc/extra/manual.css
BayesFactor/inst/doc/index.R
BayesFactor/inst/doc/index.Rmd
BayesFactor/inst/doc/index.html
BayesFactor/inst/doc/manual.R
BayesFactor/inst/doc/manual.Rmd
BayesFactor/inst/doc/manual.html
BayesFactor/inst/etc
BayesFactor/inst/etc/gibi.html
BayesFactor/inst/etc/gibi.txt
BayesFactor/inst/tests
BayesFactor/inst/tests/test-anovaBF.R
BayesFactor/man
BayesFactor/man/BFBayesFactor-class.Rd
BayesFactor/man/BFBayesFactorList-class.Rd
BayesFactor/man/BFInfo.Rd
BayesFactor/man/BFManual.Rd
BayesFactor/man/BayesFactor-package.Rd
BayesFactor/man/anovaBF.Rd
BayesFactor/man/as.BFBayesFactor.Rd
BayesFactor/man/compare-methods.Rd
BayesFactor/man/extractBF-methods.Rd
BayesFactor/man/generalTestBF.Rd
BayesFactor/man/linearReg.R2stat.Rd
BayesFactor/man/lmBF.Rd
BayesFactor/man/logMeanExpLogs.Rd
BayesFactor/man/model-classes.Rd
BayesFactor/man/nWayAOV.Rd
BayesFactor/man/oneWayAOV.Fstat.Rd
BayesFactor/man/options-BayesFactor.Rd
BayesFactor/man/plot.BFBayesFactor.Rd
BayesFactor/man/plot.BFBayesFactorTop.Rd
BayesFactor/man/posterior-methods.Rd
BayesFactor/man/puzzles.Rd
BayesFactor/man/recompute-methods.Rd
BayesFactor/man/regressionBF.Rd
BayesFactor/man/ttest.tstat.Rd
BayesFactor/man/ttestBF.Rd
BayesFactor/src
BayesFactor/src/BFPCL.h
BayesFactor/src/Makevars
BayesFactor/src/common.c
BayesFactor/src/debug.c
BayesFactor/src/linearReg.c
BayesFactor/src/logMean.c
BayesFactor/src/matrix.c
BayesFactor/src/nWayAOV.c
BayesFactor/src/oneWayAOV.c
BayesFactor/src/ttest.c
BayesFactor/tests
BayesFactor/tests/run-all.R