Class "massopt" stores options for fitting and plotting models for mass spectrometry data

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Description

Class "massopt" stores options for fitting and plotting models models for mass spectrometry data in particular; this is a subclass of class opt that contains options applicable to all model types

Details

See opt-class and for the specification of fitting/plotting options that are not specific to the mass class type.

Objects from the Class

Objects can be created by calls of the form new("massopt", ...) or massopt(...)

Slots

axis.by:

Object of class "numeric" that allows labels on the bars representing the mass spectra to to skipped, e.g., axis.by=2 will add a label to every second bar

scale.concen:

Object of class "logical" that scales the concentration matrix using the algorithm found in the function scaleConList.

nummaxtraces:

Object of class "nummaxtraces" that defaults to zero; if greater than zero then this number of the traces with the maximum amplitude are plotted

Author(s)

Katharine M. Mullen, Ivo H. M. van Stokkum

See Also

examineFit, fitModel, opt-class, specopt-class

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