residPart: Generic function residPart in Package 'TIMP'

In TIMP: Fitting Separable Nonlinear Models in Spectroscopy and Microscopy

Description

Methods for function residPart in Package ‘TIMP’ determine the part of the residual vector associated with a single ‘part’ of the dataset(s).

Usage

residPart(model, group, multimodel, thetalist, clpindepX, finished,
returnX, rawtheta)

Arguments

model	Object of class dat; switches on this argument.
group	list of vector pairs (x2 index, dataset index) for which the part of the residual vector is to be determined
multimodel	Object of class multimodel
thetalist	Object of class multitheta
clpindepX	Object of class matrix containing the matrix determined directly by the nonlinear parameters (e.g., a concentration matrix in the case of a kinetic model) in the case that this matrix does not depend on the x2 index
finished	logical determining whether fitting is finished that triggers the storage of results
returnX	logical determining whether to just return the matrix X directly dependent on nonlinear parameters; this is used in the finite difference derivative of X used to get standard error estimates on the conditionally linear parameters.
rawtheta	numeric vector of nonlinear parameters to be optimized by nls; this is used in the finite difference derivative of X used to get standard error estimates on the conditionally linear parameters.

See Also

dat-class, spec-class, kin-class

TIMP documentation built on May 2, 2019, 5:55 p.m.