SyntrenEcoli: SynTReN E. coli

In biclust: BiCluster Algorithms

Description

Synthetic microarray data matrix generated by Syntren for 20 experiments using 200 genes from Transcription Regulatory Network of Shen-Orr et al. (2002).

Usage

  data(SyntrenEcoli)
  

Format

Data structure with information about the expression levels of 200 genes over 20 conditions. Conditions are named as C1... C20

Source

SynTReN software can be downloaded at http://homes.esat.kuleuven.be/~kmarchal/SynTReN/index.html

References

Shen-Orr et al., "Network motifs in the transcriptional regulation network of Escherichia coli", Nature Genetics 2002, volume 31, pages 64-68.

Tim Van den Bulcke et al., "SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms", BMC Bioinformatics, 2006, volume 7, number 43.

biclust documentation built on May 2, 2019, 5:56 p.m.