bimax.grid: Parameter Grid for BCBimax Biclustering

In biclust: BiCluster Algorithms

Description

Generates a list containing parameter settings for the ensemble algorithm.

Usage

bimax.grid(method = "BCBimax", minr = c(10, 11), minc = c(10, 11), number = 10)

Arguments

method	Here BCBimax, to perform Bimax algorithm
minr	Minimum row size of resulting bicluster.
minc	Minimum column size of resulting bicluster.
number	Number of Bicluster to be found.

Value

A list containing parameter settings

Author(s)

Sebastian Kaiser [e-mail]

See Also

ensemble, BCBimax

Examples

bimax.grid()

Example output

Loading required package: MASS
Loading required package: grid
Loading required package: colorspace
Loading required package: lattice
[[1]]
[[1]]$method
[1] "BCBimax"

[[1]]$minr
[1] 10

[[1]]$minc
[1] 10

[[1]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[2]]
[[2]]$method
[1] "BCBimax"

[[2]]$minr
[1] 11

[[2]]$minc
[1] 10

[[2]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[3]]
[[3]]$method
[1] "BCBimax"

[[3]]$minr
[1] 10

[[3]]$minc
[1] 11

[[3]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[4]]
[[4]]$method
[1] "BCBimax"

[[4]]$minr
[1] 11

[[4]]$minc
[1] 11

[[4]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"

biclust documentation built on May 2, 2019, 5:56 p.m.