coseq: Co-Expression Analysis of Sequencing Data

Gaussian and Poisson mixture models are implemented to cluster biological entities (e.g., genes) from high-throughput sequencing data. Parameter estimation is performed using the EM algorithm and model selection criteria (to choose the number of clusters) are provided.

Package details

AuthorAndrea Rau, Cathy Maugis-Rabusseau
Bioconductor views GeneExpression RNASeq Sequencing Software
MaintainerAndrea Rau <[email protected]>
LicenseGPL (>=3)
Package repositoryView on R-Forge
Installation Install the latest version of this package by entering the following in R:
install.packages("coseq", repos="")

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coseq documentation built on May 31, 2017, 2:38 a.m.