Man pages for coseq
Co-Expression Analysis of Sequencing Data
| clusterEntropy | Calculation of per-cluster entropy |
| compareARI | Pairwise comparisons of ARI values among a set of clustering... |
| compareICL | Compare corrected ICL values after data transformation |
| coseq | Co-expression or co-abudance analysis of high-throughput... |
| coseq-package | Co-expression and co-abundance analysis of high-throughput... |
| coseq_run | Co-expression analysis |
| coseqUsersGuide | View coseq User's Guide |
| matchContTable | Permute columns of a contingency table |
| NormMixClus | Normal mixture model estimation and selection for a series of... |
| NormMixClus_K | Normal mixture model estimation |
| NormMixParam | Calculate the mean and covariance for a Normal mixture model |
| plot.coseq | Visualize results from coseq clustering |
| plot.NormMixClus | Visualize results from clustering using a Normal mixture... |
| plot.NormMixClus_K | Plot NormMixClus_K object |
| plot.PoisMixClus | Visualize results from clustering using a Poisson mixture... |
| summary.coseq | Summarize results from clustering using a Poisson or Gaussian... |
| summary.NormMixClus | Summarize results from clustering using a Normal mixture... |
| summary.NormMixClus_K | Summarize results from clustering using a Normal mixture... |
| summary.PoisMixClus | Summarize results from clustering using a Poisson mixture... |
| transform_RNAseq | Transform RNA-seq data using common transformations |
