Files in cthmm

Latent Continuous Time Markov Chains

DESCRIPTION

NAMESPACE

inst/doc/manual.pdf

inst/doc/manual.Rnw

demo/run_EM.R demo/run_covariance.R R/louis.R R/update.emission.params.R R/joint_first_moments.r R/phase.hazard.r R/Numeric_hessian.R R/update.init.params.r R/indiv.emission.init.rate.r R/expected_dur_trans.R R/covariates_max.R R/design_setup.r R/get_mean.R R/E_step_init_emission.r R/update.rate.params.r R/EM.R R/trans_probs_all.R R/eigen_decomp_list_R.R R/transition_prob_list.R R/Cappe_second_moment.R R/transition_probs.R R/Cappe_functions_tau.R R/functionals.R R/cappe_first_moment.R R/eigen_moment2.R R/rcpparma_forwardback.R R/mat_exp_eigen_R.R

src/multinom.cpp

src/eigen_moments2.cpp

src/joint_mean_markov_rewards.cpp

src/trans_loop.cpp

src/emission_init.cpp

src/joint_mean_markov_jumps.h

src/uniformization_mean.h

src/get_mean.h

src/Makevars.win

src/joint_mean_markov_rewards.h

src/joint_mean_markov_jumps.cpp

src/get_mean.cpp

src/ztrti2.f

src/eigen_decomp_cpp.cpp

src/mat_exp_eigen.h

src/eigen_moments2.h

src/uniformization.cpp

src/mat_exp_eigen.cpp

src/forwardback.h

src/Makevars

src/trans_probs_all.cpp

src/zgetri.f

src/auxmat_cpp.h

src/forwardback.cpp

src/auxmat_cpp.cpp

src/ztrtri.f

src/dur_loop.cpp

src/test_joint_means.cpp

man/outerproduct.Rd man/t1_1.Rd man/t1_1_Ni.Rd man/get.covariate.array.Rd man/s_1_oij.Rd man/update.rate.params.Rd man/init_hessian_louis.Rd man/s_1_nij.Rd man/emission_hessian_louis.Rd man/s_1_zi.Rd man/rate_hessian_louis.Rd man/get_covariance.Rd man/t1_1_di.Rd man/emission_score_louis.Rd man/get.suff.stat.table.Rd man/init_score_louis.Rd man/t1_1_nij.Rd man/phase.hazard.Rd man/update.init.params.Rd man/get.rate.matrix.list.Rd man/se.dist.times.Rd man/hazard_times.Rd man/s_1.Rd man/se.haz.times.Rd man/E.step.emission.init.all.Rd man/louis_decomp_score_sq.Rd man/t1_1_oij.Rd man/phase.surv.Rd man/element.indices.Rd man/construct.rates.setup.Rd man/get.deriv.array.Rd man/diff_theta_beta_array.Rd man/get_M1_M2_list.Rd man/rate_score_louis.Rd man/t1_1_zi.Rd man/EM.Rd man/get.emission.matrix.list.Rd man/sub_dist_times.Rd man/get_M1_M2.Rd man/get_variance.Rd man/louis_information.Rd man/construct.emission.setup.Rd man/update.emission.params.Rd man/get.init.matrix.list.Rd man/s_1_di.Rd man/construct.init.setup.Rd man/s_1_Ni.Rd

data/DDO_data.RData

data/panel_demodata.RData

cthmm documentation built on May 2, 2019, 5:46 p.m.