get.emission.matrix.list: Individual Emission Matrices

In cthmm: Latent Continuous Time Markov Chains

Description

Obtain initiatl distribution matrices for each individual based on given parameter values and individual-specific covariates.

Usage

  get.emission.matrix.list(current.params, emission.setup,
    num.states, num.obs.states, num.subjects, do.list = T,
    time.dep.emission = F)

Arguments

current.params	values of emission parameters
emission.setup	list with emission distribution setup information
num.states	number of latent states in the CTMC
num.obs.states	number of observed states
num.subjects	number of individuals in the study
do.list	If T, return as list, otherwise return as array
time.dep.emission	(not supported) Indicator if emission distribution has time dependent covariates.

Details

Can be output as an array or list.

Value

an array of (dim num.states,num.subjects) or list with the fitted emission distribution for each subject.

Author(s)

Jane Lange

Examples

## Not run: 
library(cthmm)
data(DDO_data)
emission.list=get.emission.matrix.list(current.params=DDO_EM$params[8:10],
            emission.setup=emission.setup,num.states=4,
           num.obs.states=3, num.subjects=500, do.list=T)

## End(Not run)

cthmm documentation built on May 2, 2019, 5:46 p.m.