API for gRbase
A package for graphical modelling in R

Global functions
..contains	Source code
..in.list	Source code
..is.cont	Source code
..is.graphical	Source code
..readg	Source code
..showg	Source code
..varset	Source code
.add.edge	Source code
.arrayExpand	Source code
.arrayListExpand	Source code
.asdgCMatrix	Source code
.cell2entry2	Source code
.cell2entryR	Source code
.createJTreeGraph	Source code
.dagList_internal	Source code
.delete.edge	Source code
.dgCMatrix	Source code
.factgrid1Prim	Source code
.factgrid2Prim	Source code
.getCellNumberR	Source code
.mcsmarkedMAT	Source code
.nextCellR	Source code
.nextCellSliceIndic	Source code
.nextCellSliceR	Source code
.onLoad	Source code
.permuteCellEntriesC	Source code
.permuteCellEntriesR	Source code
.ripMAT	Source code
.slice2entry	Source code
.tableOp	Source code
.ugList_internal	Source code
BodyFat	Man page
Nutrimouse	Man page
addEdge	Man page
addEdge.gModel	Man page Source code
all.subsets	Man page Source code
ancestors	Man page Source code
ancestralGraph	Man page Source code
ancestralSet	Man page Source code
aperm2	Man page
arrayCombine	Man page Source code
arrayExtendDomain	Man page Source code
as.adjMAT	Man page Source code
as.gmData	Man page Source code
as.gmData.array	Man page Source code
as.gmData.data.frame	Man page Source code
as.gmData.table	Man page Source code
as.parray	Man page Source code
asdgCMatrix	Man page Source code
asdgCMatrix.Matrix	Man page Source code
asdgCMatrix.matrix	Man page Source code
ashtrees	Man page
breastcancer	Man page
cad1	Man page
cad2	Man page
carcass	Man page
carcassall	Man page
cell2entry	Man page Source code
chestSim	Man page
chestSim1000	Man page
chestSim10000	Man page
chestSim100000	Man page
chestSim500	Man page
chestSim50000	Man page
children	Man page Source code
closure	Man page Source code
coerceGraph	Man page Source code
coerceGraph.graphNEL	Man page Source code
coerceGraph.igraph	Man page Source code
coerceGraph.matrix	Man page Source code
colSumsPrim	Man page Source code
colmat2list	Man page Source code
colwiseProd	Man page Source code
combnPrim	Man page Source code
compareModels	Man page
compile	Man page
conc2pcor	Man page Source code
contains	Man page
cov2pcor	Man page Source code
dag	Man page Source code
dagList	Man page Source code
dagListMAT	Man page
dagMAT	Man page
data2parray	Man page Source code
dataOrigin	Man page Source code
dataOrigin.gmData	Man page Source code
description	Man page
description.gmData	Man page
description<-	Man page
description<-.gmData	Man page
dietox	Man page
dropEdge	Man page
dropEdge.gModel	Man page Source code
dual.rep	Man page Source code
dumping	Man page
edgeList	Man page Source code
edgeList.graphNEL	Man page Source code
edgeList.matrix	Man page Source code
edgeListMAT	Man page Source code
ell	Man page Source code
ellK	Man page
entry2cell	Man page Source code
extract.power	Man page Source code
factGrid	Man page Source code
fit	Man page Source code
fit.ggm	Man page Source code
fit.hllm	Man page Source code
formula	Man page
formula.gModel	Man page
formula<-	Man page
formula<-.gModel	Man page
gModel	Man page Source code
gModel-class	Man page
gRbase	Man page
gRfit	Man page
gRfit-class	Man page
getCellNumberC	Man page Source code
getCliques	Source code
getCliques.default	Source code
getCliques.graphNEL	Source code
getFit	Man page
getFit.gRfit	Man page
getFit<-	Man page
getFit<-.gRfit	Man page
ggm	Man page Source code
glist2adjMAT	Man page Source code
gmData	Man page
gmData.gModel	Man page
gmData<-	Man page
gmData<-.gModel	Man page
graphNEL2ftM	Man page Source code
hllm	Man page Source code
hllm-class	Man page
igraph-class	Man page
in.list	Man page
intersectPrim	Man page
iplot	Man page Source code
iplot.graphNEL	Man page Source code
ips	Man page Source code
is.DAG	Man page Source code
is.DAG.Matrix	Man page
is.DAG.graphNEL	Man page Source code
is.DAG.matrix	Man page
is.DAGMAT	Man page Source code
is.TUG	Man page Source code
is.TUG.Matrix	Man page
is.TUG.graphNEL	Man page Source code
is.TUG.matrix	Man page
is.TUGMAT	Man page Source code
is.UG	Man page Source code
is.UG.Matrix	Man page
is.UG.graphNEL	Man page Source code
is.UG.matrix	Man page
is.UGMAT	Man page Source code
is.adjMAT	Man page Source code
is.complete	Man page Source code
is.cont	Man page
is.decomposition	Man page Source code
is.graphical	Man page
is.insetlist	Man page Source code
is.simplicial	Man page Source code
is.subsetof	Man page Source code
isGSD_glist	Man page Source code
isin	Man page Source code
jTree	Man page Source code
jTree.Matrix	Man page Source code
jTree.graphNEL	Man page Source code
jTree.igraph	Man page Source code
jTree.matrix	Man page Source code
junctionTree	Man page
junctionTree.Matrix	Man page
junctionTree.graphNEL	Man page
junctionTree.igraph	Man page
junctionTree.matrix	Man page
lapplyI2V	Man page
lapplyMatch	Man page Source code
lapplyV2I	Man page
latent	Man page
latent.gmData	Man page
latent<-	Man page
latent<-.gmData	Man page
list2rhsFormula	Man page
list2rhsf	Man page Source code
lizard	Man page
lizardAGG	Man page
lizardRAW	Man page
makeDimNames	Man page Source code
matchPrim	Man page Source code
math	Man page
mathmark	Man page
matrix2list	Man page Source code
maxCliqueMAT	Source code
maximalSets	Man page Source code
mcs	Man page Source code
mcs.Matrix	Man page Source code
mcs.graphNEL	Man page Source code
mcs.igraph	Man page Source code
mcs.matrix	Man page
mcsMAT	Man page
mcsMATR	Man page
mcsMAT_spCpp	Man page Source code
mcsMAT_spR	Man page Source code
mcsMAT_stC	Man page
mcsMAT_stCpp	Man page Source code
mcsMAT_stR	Man page Source code
mcsmarked	Man page
mcsmarked.graphNEL	Man page
mcsmarked.igraph	Man page
mcsmarked.matrix	Man page
mcsmarkedMAT	Man page Source code
mildew	Man page
milkcomp	Man page
milkcomp1	Man page
minimalSets	Man page Source code
minimalTriang	Man page Source code
minimalTriangMAT	Man page Source code
moralMAT	Man page
moralize	Man page Source code
moralize.Matrix	Man page Source code
moralize.graphNEL	Man page Source code
moralize.igraph	Man page Source code
moralize.matrix	Man page Source code
moralizeMAT	Man page Source code
moralizeMAT_spC	Man page Source code
moralizeMAT_stR	Man page Source code
mpd	Man page Source code
mpdMAT	Man page Source code
nLevels	Man page Source code
nLevels.array	Man page Source code
nLevels.gmData	Man page Source code
nLevels.parray	Man page Source code
nLevels<-	Man page
nLevels<-.gmData	Man page
names2pairs	Man page Source code
newgmData	Man page
nextCell	Man page Source code
nextCellSlice	Man page Source code
nominal	Man page
nominal.gmData	Man page
nominal<-	Man page
nominal<-.gmData	Man page
nonEdgeList	Man page Source code
nonEdgeList.graphNEL	Man page Source code
nonEdgeList.matrix	Man page Source code
nonEdgeListMAT	Man page Source code
obs	Man page Source code
observations	Man page Source code
observations.gmData	Man page Source code
observations<-	Man page
observations<-.gmData	Man page
ordinal	Man page
ordinal.gmData	Man page
ordinal<-	Man page
ordinal<-.gmData	Man page
outerPrim	Man page Source code
outfun	Man page Source code
pairs2num	Man page Source code
parents	Man page Source code
parray	Man page Source code
partial.corr.matrix	Man page Source code
permuteCellEntries	Man page Source code
plot.ripOrder	Man page Source code
print.gModel	Man page Source code
print.gRfit	Man page Source code
print.gmData	Man page Source code
print.parray	Man page Source code
print.ripOrder	Man page Source code
processFormula	Man page
propagate	Man page
properties_glist	Man page Source code
querygraph	Man page Source code
random_dag	Man page Source code
rats	Man page
readf	Man page Source code
readg	Man page
reinis	Man page
removeRedundant	Man page Source code
rhsFormula2list	Man page
rhsf2list	Man page Source code
rip	Man page Source code
rip.Matrix	Man page Source code
rip.graphNEL	Man page Source code
rip.igraph	Man page Source code
rip.matrix	Man page Source code
ripMAT	Man page Source code
ripMAT2	Man page
rowSumsPrim	Man page Source code
rowmat2list	Man page Source code
selectOrder	Man page Source code
setdiffPrim	Man page
shortNames	Man page Source code
shortNames.gmData	Man page Source code
shortNames<-	Man page
shortNames<-.gmData	Man page
showf	Man page Source code
showg	Man page
simplicialNodes	Man page Source code
slice2entry	Man page Source code
solveSPD	Man page Source code
sp_fromto	Man page Source code
sp_getXM	Man page Source code
sp_getXi	Man page Source code
sp_getXij	Man page Source code
sp_getXj	Man page Source code
sp_getXtf	Man page Source code
sp_moralize	Man page Source code
sp_setXM1	Man page Source code
sp_setXij1	Man page Source code
sp_setXtf1	Man page Source code
sp_topoSort	Man page Source code
st_fromto	Man page Source code
stepwise	Man page Source code
stepwise.default	Man page Source code
stepwise.hllm	Man page
subsetof	Man page Source code
summary.gRfit	Man page Source code
summary.gmData	Man page Source code
tableDiv	Man page Source code
tableMargin	Man page
tableMult	Man page Source code
tableOp	Man page Source code
tableOp2	Man page
tablePerm	Man page Source code
tableSlice	Man page
tableSlicePrim	Man page Source code
topoSort	Man page Source code
topoSort.Matrix	Man page Source code
topoSort.graphNEL	Man page Source code
topoSort.matrix	Man page
topoSortMAT	Man page Source code
topoSortMAT_spCpp	Man page Source code
topoSortMAT_stCpp	Man page Source code
topoSort_vparList	Man page Source code
triang2R	Man page
triangulate	Man page Source code
triangulate.Matrix	Man page Source code
triangulate.graphNEL	Man page Source code
triangulate.igraph	Man page Source code
triangulate.matrix	Man page Source code
triangulateMAT	Man page Source code
triangulateMAT_spCpp	Man page Source code
triangulateMAT_spR	Man page Source code
triangulateMAT_stC	Man page Source code
triangulateMAT_stCpp	Man page Source code
ug	Man page Source code
ugList	Man page Source code
ugListMAT	Man page
ugMAT	Man page
uniquePrim	Man page Source code
unlistPrim	Man page Source code
update.gModel	Man page Source code
validVarTypes	Man page Source code
valueLabels	Man page Source code
valueLabels.array	Man page Source code
valueLabels.gmData	Man page Source code
valueLabels.parray	Man page Source code
valueLabels<-	Man page
valueLabels<-.gmData	Man page
varNames	Man page Source code
varNames.array	Man page Source code
varNames.gmData	Man page Source code
varNames.parray	Man page Source code
varNames<-	Man page
varNames<-.gmData	Man page
varTypes	Man page
varTypes.gmData	Man page
varTypes<-	Man page
varTypes<-.gmData	Man page
varset	Man page
vpaL2adjMAT	Man page Source code
vpaL2tfM	Man page Source code
vpar	Man page Source code
vpar.Matrix	Man page
vpar.graphNEL	Man page Source code
vpar.matrix	Man page
vparMAT	Man page Source code
vparlist2tf	Man page
which.arr.ind	Man page Source code
wine	Man page