ugdag: Create undirected and directed graphs

In gRbase: A package for graphical modelling in R

Description

These functions are wrappers for creation of graphs as implemented by graphNEL objects in the graph package.

Usage

ug(..., result="NEL")
dag(..., result="NEL", forceCheck=FALSE)
ugList(x, result="NEL")
dagList(x, result="NEL", forceCheck=FALSE)

Arguments

...	A generating class for a graph, see examples below
x	A list containing a generating class for a graph, see examples below
forceCheck	Logical determining if it should be checked if the graph is acyclical
result	The format of the graph. The possible choices are "NEL" (for a graphNEL object), "matrix" (for an adjacency matrix), "igraph" (for an igraph object), "Matrix" (for a sparse matrix).

Value

Functions ug(), dag(), ugList() and dagList() return a 'graphNEL' object, an adjacency matrix or an 'igraph' object.

Author(s)

S<f8>ren H<f8>jsgaard, [e-mail]

Examples

ugr <- ug(~me:ve,~me:al,~ve:al,~al:an,~al:st,~an:st)

ugr <- ug(~me:ve:al,~al:an:st)

ugr <- ug(c("me","ve"),c("me","al"),c("ve","al"),c("al","an"),c("al","st"),c("an","st")) 

ugr <- ug(~me:ve:al, c("me","ve"),c("me","al"),c("ve","al"),c("al","an"),c("al","st"),c("an","st"))


dagr <- dag(c("me","ve"),c("me","al"),c("ve","al"),c("al","an"),c("al","st"),c("an","st"))


dagr <- dag(~me:ve,~me:al,~ve:al,~al:an,~al:st,~an:st)


dagr <- dag(~me:ve:al,~ve:al:an)

edges(ugr)
nodes(ugr)

edges(dagr)
nodes(dagr)

ugList(list(~me:ve:al,~al:an:st))
dagList(list(~me:ve:al,~ve:al:an))

gRbase documentation built on May 2, 2019, 4:51 p.m.